UGENE
UGENE is a GUI for DNA and protein sequence visualization, alignment, assembly and annotation. It integrates dozens of well-known biological tools, algorithms, and original tools in the context of genomics, evolutionary biology, virology, and other branches of life science.
GUI
The UGENE GUI can be accessed via the Open OnDemand Applications. https://ondemand.otago.ac.nz/pun/sys/dashboard/batch_connect/sys/ood_ugene_apptainer
hardware-accelerated 3D visualisation can be enabled to improve 3D visualisation (e.g. the 3D viewer)
OpenCL can be enabled to improve performance of a few select algorithms (Smith-Waterman, UGENE Genome Aligner)