UGENE
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https://ugene.net

UGENE is a GUI for DNA and protein sequence visualization, alignment, assembly and annotation. It integrates dozens of well-known biological tools, algorithms, and original tools in the context of genomics, evolutionary biology, virology, and other branches of life science.

GUI
^^^
The UGENE GUI can be accessed via the Open OnDemand Applications.
https://ondemand.otago.ac.nz/pun/sys/dashboard/batch_connect/sys/ood_ugene_apptainer

* hardware-accelerated 3D visualisation can be enabled to improve 3D visualisation (e.g. the 3D viewer)
* OpenCL can be enabled to improve performance of a few select algorithms (Smith-Waterman, UGENE Genome Aligner)